BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021C09LP1|AL427738
(988 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1794 1626 0.0
>3x_Contig1794
Length = 36744
Score = 1626 bits (813), Expect = 0.0
Identities = 955/990 (96%), Gaps = 19/990 (1%)
Strand = Plus / Minus
Query: 1 gtcagtagatatatgattacgaag-ccaccgacatggcaaagcaggatggaatcgttgga 59
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 28175 gtcagtagatatatgattacgaaggccaccgacatggcaaagcaggatggaatcgttgga 28116
Query: 60 gctcggataasatactaacaaattcgggaaaasattttcctcggtggaattgtaaaggtt 119
|||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 28115 gctcggataagatactaacaaattcgggaaaagattttcctcggtggaattgtaaaggtt 28056
Query: 120 ggtgacatcagcgccaggctttgccaacggttcgaaaagaatattatsagcagatgagga 179
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 28055 ggtgacatcagcgccaggctttgccaacggttcgaaaagaatattatgagcagatgagg- 27997
Query: 180 agaattcgataattgttgtsacctattagaaccggggtcagattccggtgaccctactgg 239
||||||||||||| ||| | ||| ||| |||||| ||||||||| |||||||||||||
Sbjct: 27996 agaattcgataat--gtgtga-cta-tag-accggg-tcagattcc-gtgaccctactgg 27944
Query: 240 agggcttgattctgtgtcacgtcgttgggaactagacgcagcttcttccctttgagcgtc 299
||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 27943 agg--ctgattctgtgtcacgtcgtt-ggaactagacgcagc-tcttccctttgagcgtc 27888
Query: 300 tctsaacatacgtmacgatttaatggatccctttctcttagacaagagagcatccccgct 359
||| ||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 27887 tctgaacatacgtaacgatttaat-gatccc-ttctcttagacaagagagcatccccgct 27830
Query: 360 taabatttttttagaagtagctatcacggagtcatcaaacaaacagaaaccaaggttaat 419
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27829 taagatttttttagaagtagctatcacggagtcatcaaacaaacagaaaccaaggttaat 27770
Query: 420 caacaggaacttaatttcatcctcactttcctttgatattaaaaatsaccctaaggggtt 479
|||||||||||||||||||||||||||| | |||||||||||||| |||||||||||||
Sbjct: 27769 caacaggaacttaatttcatcctcactt--ccttgatattaaaaatgaccctaaggggtt 27712
Query: 480 gaacttcgataagaaataatggtcgaatttcaaagtactgtctataacatgcsatgaaga 539
||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 27711 gaacttcgataagaaataatggtcgaa-ttcaaagtactgtctataacatgcgatgaaga 27653
Query: 540 gaccacggaacttttcctcgaagacggagcagtgcctgahgtgatcccaacgttagaatt 599
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 27652 gaccacggaacttttcctcgaagacggagcagtgcctgaagtgatcccaacgttagaatt 27593
Query: 600 ggcccgasaattcgatgtgttgccagttttggtattaccagaatcaacaggttgctggtc 659
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27592 ggcccgagaattcgatgtgttgccagttttggtattaccagaatcaacaggttgctggtc 27533
Query: 660 agcatcctgttccatttcatgcaaaayatcaacgatcaacgaaatctcaagcaagtatgg 719
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 27532 agcatcctgttccatttcatgcaaaagatcaacgatcaacgaaatctcaagcaagtatgg 27473
Query: 720 atccaaatccacagtcaacatagatacaccttcatggccctccttaaattctggacaatt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27472 atccaaatccacagtcaacatagatacaccttcatggccctccttaaattctggacaatt 27413
Query: 780 cttcaacgagttgataaactcctgtgccaactgcgtaccgtacgggtagtgtttcaagaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27412 cttcaacgagttgataaactcctgtgccaactgcgtaccgtacgggtagtgtttcaagaa 27353
Query: 840 cttcttaaacaatttcctcactgcaatcttttgc-aaatcaaatacctggacaatttctg 898
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 27352 cttcttaaacaatttcctcactgcaatcttttgcaaaatcaaatacctggacaatttctg 27293
Query: 899 caattctaaattacacctatccaaatgctggttgattaacttgatcctacgtaacttttt 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27292 caattctaaattacacctatccaaatgctggttgattaacttgatcctacgtaacttttt 27233
Query: 959 gttctcatccttaatcaaatgcmactgagt 988
|||||||||||||||||||||| |||||||
Sbjct: 27232 gttctcatccttaatcaaatgcaactgagt 27203
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6245
Number of Sequences: 1807
Number of extensions: 6245
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 988
length of database: 10,358,551
effective HSP length: 16
effective length of query: 972
effective length of database: 10,329,639
effective search space: 10040409108
effective search space used: 10040409108
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)